Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
APH1AQ96BI3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APH1AQ96BI3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 C8orf49-201ENST00000525043 1968 ntBASIC13.25□□□□□ -0.29
APH1AQ96BI3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 AP000593.2-201ENST00000542775 1433 ntBASIC13.25□□□□□ -0.29
APH1AQ96BI3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 RNA5SP412-201ENST00000516234 123 ntBASIC13.25□□□□□ -0.29
APH1AQ96BI3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 AC138696.2-201ENST00000607376 223 ntBASIC13.25□□□□□ -0.29
APH1AQ96BI3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 ZACNP1-201ENST00000612259 710 ntBASIC13.25□□□□□ -0.29
APH1AQ96BI3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.25□□□□□ -0.29
APH1AQ96BI3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APH1AQ96BI3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.25□□□□□ -0.29
APH1AQ96BI3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 AC011840.2-201ENST00000563063 1520 ntBASIC13.24□□□□□ -0.29
APH1AQ96BI3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 AL138725.1-201ENST00000407347 1314 ntBASIC13.24□□□□□ -0.29
APH1AQ96BI3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms