Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCG3Q8WXD2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 AC079776.1-201ENST00000401540 1152 ntBASIC15.4■□□□□ 0.06
SCG3Q8WXD2 MIR1909-201ENST00000411312 80 ntBASIC15.4■□□□□ 0.06
SCG3Q8WXD2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.4■□□□□ 0.06
SCG3Q8WXD2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 BRI3BPP1-201ENST00000594224 787 ntBASIC15.4■□□□□ 0.06
SCG3Q8WXD2 AL512343.1-201ENST00000605837 169 ntBASIC15.4■□□□□ 0.06
SCG3Q8WXD2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.4■□□□□ 0.06
SCG3Q8WXD2 BEND3P1-201ENST00000421591 1944 ntBASIC15.4■□□□□ 0.06
SCG3Q8WXD2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCG3Q8WXD2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
SCG3Q8WXD2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.39■□□□□ 0.06
SCG3Q8WXD2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AC133552.6-201ENST00000613406 534 ntBASIC15.39■□□□□ 0.05
SCG3Q8WXD2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCG3Q8WXD2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SCG3Q8WXD2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SCG3Q8WXD2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms