Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHKBP1Q8TBC3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
SHKBP1Q8TBC3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 RN7SKP230-201ENST00000365642 335 ntBASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC092506.1-202ENST00000401022 528 ntBASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC104073.2-201ENST00000453737 312 ntBASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC005840.4-201ENST00000541242 2494 ntBASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC079328.1-201ENST00000560358 952 ntBASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AP001505.2-201ENST00000616815 443 ntBASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC005912.2-201ENST00000619492 2400 ntBASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHKBP1Q8TBC3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 TUBB8P8-201ENST00000458717 1058 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AC013355.1-201ENST00000562625 723 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 RN7SL774P-201ENST00000577467 290 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AC091812.3-201ENST00000621362 345 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AC004923.1-202ENST00000642106 209 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AC112693.3-201ENST00000624819 1983 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 LINC00528-201ENST00000600723 2160 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AC117489.1-201ENST00000625169 3217 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 AC004899.1-201ENST00000424687 1714 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 SHC1P1-201ENST00000425230 1745 ntBASIC15.63■□□□□ 0.09
SHKBP1Q8TBC3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.62■□□□□ 0.09
SHKBP1Q8TBC3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms