Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 FO681548.1-201ENST00000455617 1132 ntBASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 RN7SL692P-201ENST00000464677 288 ntBASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 MIR5189-201ENST00000577370 114 ntBASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC004466.1-201ENST00000599515 1080 ntBASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AC145423.3-201ENST00000615987 467 ntBASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 SNX18-202ENST00000343017 3140 ntBASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCDC116Q8IYX3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AC067750.1-201ENST00000608826 6545 ntBASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AP005018.1-201ENST00000525475 301 ntBASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AC068587.3-201ENST00000526613 355 ntBASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AL596325.1-201ENST00000563991 1082 ntBASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.13□□□□□ -0.15
CCDC116Q8IYX3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCDC116Q8IYX3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms