Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 SORD2P-201ENST00000558556 1069 ntBASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 AC017083.2-201ENST00000608069 979 ntBASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 MIR6805-201ENST00000615055 62 ntBASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 AL136301.1-201ENST00000615830 422 ntBASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
C12orf56Q8IXR9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.08■□□□□ 0.17
C12orf56Q8IXR9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
C12orf56Q8IXR9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C12orf56Q8IXR9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C12orf56Q8IXR9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.08■□□□□ 0.17
C12orf56Q8IXR9 AC068587.6-202ENST00000641839 5619 ntBASIC16.08■□□□□ 0.17
C12orf56Q8IXR9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 KRT223P-202ENST00000449164 1292 ntBASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 AC100850.1-201ENST00000506768 649 ntBASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 MIR4259-201ENST00000584466 101 ntBASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 AC133552.6-201ENST00000613406 534 ntBASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 RN7SL832P-201ENST00000607781 1756 ntBASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf56Q8IXR9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 OR8S1-201ENST00000310194 1080 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 AC079178.1-201ENST00000420915 656 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 YBX1P6-201ENST00000442962 1002 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 RNA5SP412-201ENST00000516234 123 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 IGHV3-71-201ENST00000523324 359 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 DUX4L46-201ENST00000566845 751 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 AC132192.2-201ENST00000596206 1147 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 AC009955.4-201ENST00000597192 544 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 AC239800.4-201ENST00000603712 296 ntBASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C12orf56Q8IXR9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms