Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRTM4Q86VH4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AC007292.2-201ENST00000593524 1812 ntBASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 HSPB1P2-201ENST00000448722 546 ntBASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 BX088702.1-201ENST00000610784 235 ntBASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 MIR6799-201ENST00000620297 69 ntBASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 AL136379.1-201ENST00000623471 2642 ntBASIC14.62□□□□□ -0.07
LRRTM4Q86VH4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AL136172.1-201ENST00000598590 1394 ntBASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 SHC1P1-201ENST00000425230 1745 ntBASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AL591846.1-201ENST00000451736 433 ntBASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AC008825.2-201ENST00000603374 718 ntBASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AL096828.3-201ENST00000615354 462 ntBASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.61□□□□□ -0.07
LRRTM4Q86VH4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms