Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13□□□□□ -0.33
LRRTM1Q86UE6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AL645937.2-201ENST00000396808 931 ntBASIC13□□□□□ -0.33
LRRTM1Q86UE6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AL158212.4-201ENST00000624062 1286 ntBASIC13□□□□□ -0.33
LRRTM1Q86UE6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 AC099521.3-201ENST00000624251 2938 ntBASIC13□□□□□ -0.33
LRRTM1Q86UE6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRTM1Q86UE6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13□□□□□ -0.33
LRRTM1Q86UE6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC023794.5-201ENST00000564380 2157 ntBASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 MYADML-201ENST00000474610 2147 ntBASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC069262.1-201ENST00000539058 672 ntBASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC044860.1-202ENST00000559481 777 ntBASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.99□□□□□ -0.33
LRRTM1Q86UE6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms