Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AL157414.3-201ENST00000624276 1954 ntBASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AC006453.4-201ENST00000636949 1252 ntBASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AP000845.1-201ENST00000581677 2131 ntBASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC39BQ5VTQ0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AC023310.1-201ENST00000554836 735 ntBASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AC008687.7-202ENST00000637404 953 ntBASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 LILRP1-201ENST00000444199 1370 ntBASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.58■□□□□ 0.08
TTC39BQ5VTQ0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AC139749.1-202ENST00000617529 3139 ntBASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AL137783.1-201ENST00000623494 1896 ntBASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms