Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AC006372.4-201ENST00000624122 1543 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 OR51A9P-201ENST00000422578 911 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 RHOQP2-201ENST00000449922 579 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 NEK4P3-201ENST00000604859 544 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AC069224.1-201ENST00000566372 1715 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 SNORA57-201ENST00000383870 149 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 KRT8P6-201ENST00000399259 1207 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AC008026.2-201ENST00000495438 348 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 GCOM2-201ENST00000509133 1104 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AC087072.1-201ENST00000603727 421 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AL357143.1-203ENST00000639750 881 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 MIR4640-201ENST00000581824 90 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 AC006504.5-208ENST00000588784 2401 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LRRK2Q5S007 SIGLEC20P-201ENST00000595243 1311 ntBASIC12.66□□□□□ -0.38
LRRK2Q5S007 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC12.66□□□□□ -0.38
LRRK2Q5S007 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms