Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 AC006486.2-201ENST00000624246 2199 ntBASIC17.33■□□□□ 0.36
CERKLQ49MI3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 AC092135.3-201ENST00000624151 1846 ntBASIC17.33■□□□□ 0.36
CERKLQ49MI3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CERKLQ49MI3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.33■□□□□ 0.36
CERKLQ49MI3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 CYP4F23P-201ENST00000593402 1579 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 ELK2AP-201ENST00000392510 1007 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 AC007274.2-201ENST00000421675 662 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 AC103988.2-201ENST00000561804 725 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 AC020922.3-201ENST00000595064 547 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 AL133499.1-201ENST00000596207 608 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CERKLQ49MI3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 AC103702.1-201ENST00000548801 2630 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 AGAP7P-201ENST00000582299 2062 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 AGAP14-201ENST00000624701 2060 ntBASIC17.32■□□□□ 0.36
CERKLQ49MI3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CERKLQ49MI3 FLJ16779-201ENST00000612722 7638 ntBASIC17.31■□□□□ 0.36
CERKLQ49MI3 TMBIM7P-202ENST00000641474 1516 ntBASIC17.31■□□□□ 0.36
CERKLQ49MI3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 PDIA3P2-201ENST00000428073 158 ntBASIC17.31■□□□□ 0.36
CERKLQ49MI3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 AL353637.1-201ENST00000451571 732 ntBASIC17.31■□□□□ 0.36
CERKLQ49MI3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 AL353770.1-201ENST00000614915 403 ntBASIC17.31■□□□□ 0.36
CERKLQ49MI3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CERKLQ49MI3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CERKLQ49MI3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms