Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 KRT8P28-201ENST00000433288 1390 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 TCAF2P1-201ENST00000291129 2421 ntBASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 RNA5SP359-201ENST00000364838 113 ntBASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AL355334.1-201ENST00000417713 215 ntBASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AL031713.1-201ENST00000564813 661 ntBASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 LINC01101-201ENST00000622953 1884 ntBASIC16.1■□□□□ 0.17
TRIM71Q2Q1W2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 AL583805.1-201ENST00000391389 531 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 RPSAP15-201ENST00000448168 861 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 MIR4522-201ENST00000584932 87 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 AC009560.1-201ENST00000620208 434 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 AHCYP4-201ENST00000419201 1315 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 MRPL37P1-201ENST00000592451 1337 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 KRT8P31-201ENST00000504812 1408 ntBASIC16.09■□□□□ 0.17
TRIM71Q2Q1W2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms