Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 E2F3P2-201ENST00000447755 1422 ntBASIC19.29■□□□□ 0.68
CCDC27Q2M243 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 HSPB1P2-201ENST00000448722 546 ntBASIC19.29■□□□□ 0.68
CCDC27Q2M243 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 SORD2P-201ENST00000558556 1069 ntBASIC19.29■□□□□ 0.68
CCDC27Q2M243 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.29■□□□□ 0.68
CCDC27Q2M243 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC27Q2M243 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC27Q2M243 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 TUBB1P2-201ENST00000422712 1306 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 TUBB1P1-201ENST00000503144 1300 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AL157407.1-201ENST00000435784 904 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AL645933.1-201ENST00000440087 609 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 RPSAP36-202ENST00000494591 1261 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 FAM86HP-204ENST00000513466 959 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AC010328.2-201ENST00000597698 1111 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AL359881.2-201ENST00000602973 570 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 AL162426.1-201ENST00000624141 743 ntBASIC19.28■□□□□ 0.68
CCDC27Q2M243 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC27Q2M243 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC27Q2M243 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 WARS-203ENST00000358655 2466 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 GOLGA2P4-201ENST00000441462 777 ntBASIC19.27■□□□□ 0.68
CCDC27Q2M243 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 AC009542.2-202ENST00000619004 1067 ntBASIC19.27■□□□□ 0.68
CCDC27Q2M243 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC27Q2M243 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC27Q2M243 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms