Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AL157407.1-201ENST00000435784 904 ntBASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC011462.4-201ENST00000616866 449 ntBASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 MIR6125-201ENST00000618986 96 ntBASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 TMBIM7P-202ENST00000641474 1516 ntBASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO4Q2I0M5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AC024909.3-201ENST00000611513 2257 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 PTGER4P2-201ENST00000328411 252 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 PTGER4P3-201ENST00000458150 252 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 RN7SL582P-201ENST00000491078 279 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AC226150.1-201ENST00000544259 466 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 CYP4F36P-201ENST00000589193 186 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AC010976.2-201ENST00000609697 852 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 CYP4F23P-201ENST00000593402 1579 ntBASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms