Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 CFL1P6-201ENST00000400899 494 ntBASIC19.3■□□□□ 0.68
COL16A1Q07092 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC19.3■□□□□ 0.68
COL16A1Q07092 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC19.3■□□□□ 0.68
COL16A1Q07092 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 GOLGA2P8-201ENST00000505201 779 ntBASIC19.3■□□□□ 0.68
COL16A1Q07092 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
COL16A1Q07092 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC19.3■□□□□ 0.68
COL16A1Q07092 ABCC6P1-203ENST00000565566 1170 ntBASIC19.3■□□□□ 0.68
COL16A1Q07092 RN7SL300P-201ENST00000582522 318 ntBASIC19.3■□□□□ 0.68
COL16A1Q07092 AC021321.1-201ENST00000607397 1113 ntBASIC19.3■□□□□ 0.68
COL16A1Q07092 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC19.3■□□□□ 0.68
COL16A1Q07092 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC19.3■□□□□ 0.68
COL16A1Q07092 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC19.3■□□□□ 0.68
COL16A1Q07092 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL16A1Q07092 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL16A1Q07092 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.3■□□□□ 0.68
COL16A1Q07092 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.3■□□□□ 0.68
COL16A1Q07092 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL16A1Q07092 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
COL16A1Q07092 KRT8P43-201ENST00000406052 1458 ntBASIC19.3■□□□□ 0.68
COL16A1Q07092 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL16A1Q07092 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 AIG1-203ENST00000367596 559 ntTSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 RN7SL684P-201ENST00000465665 294 ntBASIC19.29■□□□□ 0.68
COL16A1Q07092 MYL6-215ENST00000549566 685 ntTSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.29■□□□□ 0.68
COL16A1Q07092 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.29■□□□□ 0.68
COL16A1Q07092 EMP3-204ENST00000596315 761 ntTSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 AC048382.6-201ENST00000621980 1223 ntBASIC19.29■□□□□ 0.68
COL16A1Q07092 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COL16A1Q07092 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC19.29■□□□□ 0.68
COL16A1Q07092 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC19.29■□□□□ 0.68
COL16A1Q07092 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 RPSAP12-201ENST00000435879 888 ntBASIC19.29■□□□□ 0.68
COL16A1Q07092 AC007679.1-201ENST00000458609 502 ntBASIC19.29■□□□□ 0.68
COL16A1Q07092 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC19.29■□□□□ 0.68
COL16A1Q07092 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC19.29■□□□□ 0.68
COL16A1Q07092 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC19.29■□□□□ 0.68
COL16A1Q07092 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL16A1Q07092 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.29■□□□□ 0.68
COL16A1Q07092 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC19.29■□□□□ 0.68
COL16A1Q07092 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.28■□□□□ 0.68
COL16A1Q07092 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
COL16A1Q07092 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.28■□□□□ 0.68
COL16A1Q07092 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL16A1Q07092 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 RPL18AP15-201ENST00000430258 517 ntBASIC19.28■□□□□ 0.68
COL16A1Q07092 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC19.28■□□□□ 0.68
COL16A1Q07092 AL136084.1-201ENST00000449172 318 ntBASIC19.28■□□□□ 0.68
COL16A1Q07092 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COL16A1Q07092 RPSAP70-201ENST00000504462 864 ntBASIC19.28■□□□□ 0.68
COL16A1Q07092 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC19.28■□□□□ 0.68
COL16A1Q07092 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms