Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
PRKCDQ05655 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 AL591122.2-201ENST00000624125 1853 ntBASIC13.81□□□□□ -0.2
PRKCDQ05655 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PRKCDQ05655 AL645937.2-201ENST00000396808 931 ntBASIC13.81□□□□□ -0.2
PRKCDQ05655 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 AL353779.1-201ENST00000434793 351 ntBASIC13.81□□□□□ -0.2
PRKCDQ05655 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.81□□□□□ -0.2
PRKCDQ05655 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.81□□□□□ -0.2
PRKCDQ05655 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 AC018665.1-201ENST00000622927 1362 ntBASIC13.81□□□□□ -0.2
PRKCDQ05655 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCDQ05655 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCDQ05655 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PRKCDQ05655 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.8□□□□□ -0.2
PRKCDQ05655 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.8□□□□□ -0.2
PRKCDQ05655 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PRKCDQ05655 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.8□□□□□ -0.2
PRKCDQ05655 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.8□□□□□ -0.2
PRKCDQ05655 HLA-K-203ENST00000430151 1046 ntBASIC13.8□□□□□ -0.2
PRKCDQ05655 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AL589987.1-201ENST00000453380 819 ntBASIC13.8□□□□□ -0.2
PRKCDQ05655 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AC026410.3-201ENST00000514280 936 ntBASIC13.8□□□□□ -0.2
PRKCDQ05655 IGHV3-42-201ENST00000520410 361 ntBASIC13.8□□□□□ -0.2
PRKCDQ05655 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
PRKCDQ05655 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AP001160.2-201ENST00000596071 487 ntBASIC13.8□□□□□ -0.2
PRKCDQ05655 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PRKCDQ05655 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms