Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 AC007541.1-201ENST00000570282 1469 ntBASIC13.87□□□□□ -0.19
HOXC5Q00444 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
HOXC5Q00444 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 RNU1-114P-201ENST00000365297 166 ntBASIC13.87□□□□□ -0.19
HOXC5Q00444 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC5Q00444 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.87□□□□□ -0.19
HOXC5Q00444 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 AC123567.1-201ENST00000548294 1261 ntBASIC13.87□□□□□ -0.19
HOXC5Q00444 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.87□□□□□ -0.19
HOXC5Q00444 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 AC007431.3-201ENST00000623221 587 ntBASIC13.87□□□□□ -0.19
HOXC5Q00444 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 BEND3P1-201ENST00000421591 1944 ntBASIC13.87□□□□□ -0.19
HOXC5Q00444 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HOXC5Q00444 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.87□□□□□ -0.19
HOXC5Q00444 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HOXC5Q00444 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.87□□□□□ -0.19
HOXC5Q00444 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HOXC5Q00444 AC136759.1-202ENST00000530858 2194 ntBASIC13.86□□□□□ -0.19
HOXC5Q00444 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC5Q00444 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC5Q00444 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HOXC5Q00444 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HOXC5Q00444 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC5Q00444 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
HOXC5Q00444 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 MIR661-201ENST00000384842 89 ntBASIC13.86□□□□□ -0.19
HOXC5Q00444 MIR770-201ENST00000390219 98 ntBASIC13.86□□□□□ -0.19
HOXC5Q00444 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HOXC5Q00444 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.86□□□□□ -0.19
HOXC5Q00444 TSPY16P-201ENST00000449843 468 ntBASIC13.86□□□□□ -0.19
HOXC5Q00444 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.86□□□□□ -0.19
HOXC5Q00444 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.86□□□□□ -0.19
HOXC5Q00444 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.86□□□□□ -0.19
HOXC5Q00444 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.86□□□□□ -0.19
HOXC5Q00444 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.86□□□□□ -0.19
HOXC5Q00444 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.86□□□□□ -0.19
HOXC5Q00444 RRP7BP-205ENST00000566851 833 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms