Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.42□□□□□ -0.26
VBP1P61758 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 AC026979.3-201ENST00000607315 403 ntBASIC13.42□□□□□ -0.26
VBP1P61758 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 AC010507.1-201ENST00000633895 436 ntBASIC13.42□□□□□ -0.26
VBP1P61758 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.42□□□□□ -0.26
VBP1P61758 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.42□□□□□ -0.26
VBP1P61758 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VBP1P61758 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.42□□□□□ -0.26
VBP1P61758 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
VBP1P61758 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
VBP1P61758 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 FAM220BP-201ENST00000377689 816 ntBASIC13.41□□□□□ -0.26
VBP1P61758 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.41□□□□□ -0.26
VBP1P61758 TSPY19P-201ENST00000418461 509 ntBASIC13.41□□□□□ -0.26
VBP1P61758 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.41□□□□□ -0.26
VBP1P61758 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.41□□□□□ -0.26
VBP1P61758 TSPY18P-201ENST00000441642 509 ntBASIC13.41□□□□□ -0.26
VBP1P61758 VN2R19P-201ENST00000442399 1052 ntBASIC13.41□□□□□ -0.26
VBP1P61758 AC108751.1-201ENST00000490852 363 ntBASIC13.41□□□□□ -0.26
VBP1P61758 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.41□□□□□ -0.26
VBP1P61758 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 AC025181.2-201ENST00000606994 802 ntBASIC13.41□□□□□ -0.26
VBP1P61758 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VBP1P61758 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VBP1P61758 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VBP1P61758 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VBP1P61758 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VBP1P61758 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VBP1P61758 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.4□□□□□ -0.26
VBP1P61758 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VBP1P61758 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.4□□□□□ -0.26
VBP1P61758 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms