Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.81□□□□□ -0.2
SMIM11AP58511 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SMIM11AP58511 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.81□□□□□ -0.2
SMIM11AP58511 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SMIM11AP58511 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM11AP58511 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM11AP58511 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11AP58511 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM11AP58511 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 INE2-201ENST00000630399 1874 ntBASIC13.8□□□□□ -0.2
SMIM11AP58511 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.8□□□□□ -0.2
SMIM11AP58511 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM11AP58511 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SMIM11AP58511 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM11AP58511 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.8□□□□□ -0.2
SMIM11AP58511 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.8□□□□□ -0.2
SMIM11AP58511 AC092865.5-201ENST00000545435 363 ntBASIC13.8□□□□□ -0.2
SMIM11AP58511 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.8□□□□□ -0.2
SMIM11AP58511 AC015911.4-201ENST00000588022 1070 ntBASIC13.8□□□□□ -0.2
SMIM11AP58511 AL158211.3-201ENST00000607385 239 ntBASIC13.8□□□□□ -0.2
SMIM11AP58511 AC107373.2-201ENST00000607735 490 ntBASIC13.8□□□□□ -0.2
SMIM11AP58511 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 PRSS30P-206ENST00000641773 873 ntBASIC13.8□□□□□ -0.2
SMIM11AP58511 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SMIM11AP58511 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SMIM11AP58511 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM11AP58511 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11AP58511 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SMIM11AP58511 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11AP58511 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11AP58511 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.79□□□□□ -0.2
SMIM11AP58511 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.79□□□□□ -0.2
SMIM11AP58511 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11AP58511 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11AP58511 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 AC090505.1-201ENST00000430515 1834 ntBASIC13.79□□□□□ -0.2
SMIM11AP58511 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SMIM11AP58511 TLE1P1-201ENST00000422965 589 ntBASIC13.79□□□□□ -0.2
SMIM11AP58511 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.79□□□□□ -0.2
SMIM11AP58511 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.79□□□□□ -0.2
SMIM11AP58511 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 FAM86LP-201ENST00000478302 853 ntBASIC13.79□□□□□ -0.2
SMIM11AP58511 AC109322.1-201ENST00000524499 1264 ntBASIC13.79□□□□□ -0.2
SMIM11AP58511 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 AC092364.2-202ENST00000597012 1073 ntBASIC13.79□□□□□ -0.2
SMIM11AP58511 AC027612.4-201ENST00000605371 583 ntBASIC13.79□□□□□ -0.2
SMIM11AP58511 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 MIR6074-201ENST00000612054 107 ntBASIC13.79□□□□□ -0.2
SMIM11AP58511 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
SMIM11AP58511 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11AP58511 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11AP58511 BX539320.1-201ENST00000623759 877 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms