Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VSX2P58304 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VSX2P58304 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
VSX2P58304 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.33□□□□□ -0.11
VSX2P58304 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
VSX2P58304 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VSX2P58304 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VSX2P58304 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.33□□□□□ -0.11
VSX2P58304 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
VSX2P58304 AC097376.2-205ENST00000610159 5334 ntBASIC14.33□□□□□ -0.12
VSX2P58304 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VSX2P58304 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
VSX2P58304 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 HOMER2P2-201ENST00000451621 847 ntBASIC14.33□□□□□ -0.12
VSX2P58304 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 AP006547.1-201ENST00000563435 692 ntBASIC14.33□□□□□ -0.12
VSX2P58304 DUX4L45-201ENST00000566406 1057 ntBASIC14.33□□□□□ -0.12
VSX2P58304 MIR4741-201ENST00000579822 90 ntBASIC14.33□□□□□ -0.12
VSX2P58304 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.33□□□□□ -0.12
VSX2P58304 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VSX2P58304 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.33□□□□□ -0.12
VSX2P58304 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VSX2P58304 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.33□□□□□ -0.12
VSX2P58304 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VSX2P58304 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.32□□□□□ -0.12
VSX2P58304 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VSX2P58304 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 REXO1L6P-201ENST00000603433 1515 ntBASIC14.32□□□□□ -0.12
VSX2P58304 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VSX2P58304 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.32□□□□□ -0.12
VSX2P58304 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
VSX2P58304 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.32□□□□□ -0.12
VSX2P58304 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VSX2P58304 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.32□□□□□ -0.12
VSX2P58304 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.32□□□□□ -0.12
VSX2P58304 RN7SL713P-201ENST00000582127 302 ntBASIC14.32□□□□□ -0.12
VSX2P58304 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.32□□□□□ -0.12
VSX2P58304 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VSX2P58304 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
VSX2P58304 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VSX2P58304 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.32□□□□□ -0.12
VSX2P58304 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 KRT8P4-201ENST00000509735 1454 ntBASIC14.31□□□□□ -0.12
VSX2P58304 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 INE2-201ENST00000630399 1874 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms