Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 E2F3P2-201ENST00000447755 1422 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.35□□□□□ -0.11
EPHA4P54764 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
EPHA4P54764 SLC25A24P2-201ENST00000415059 510 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 AC011742.3-201ENST00000439053 820 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 AL035414.1-201ENST00000451327 857 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 RNMTL1P1-201ENST00000454103 560 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 HIST2H2BC-201ENST00000498492 580 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 ACTG1P17-201ENST00000558391 1119 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 AP000346.4-201ENST00000614827 381 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 AC100757.4-201ENST00000626934 759 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 AC138035.3-201ENST00000622706 2791 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA4P54764 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.35□□□□□ -0.11
EPHA4P54764 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.35□□□□□ -0.11
EPHA4P54764 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.35□□□□□ -0.11
EPHA4P54764 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA4P54764 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.34□□□□□ -0.11
EPHA4P54764 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EPHA4P54764 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 AC005077.2-201ENST00000449786 690 ntBASIC14.34□□□□□ -0.11
EPHA4P54764 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.34□□□□□ -0.11
EPHA4P54764 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EPHA4P54764 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EPHA4P54764 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.34□□□□□ -0.11
EPHA4P54764 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.34□□□□□ -0.11
EPHA4P54764 ZBED1P1-201ENST00000502364 1930 ntBASIC14.34□□□□□ -0.11
EPHA4P54764 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 GRK6P1-201ENST00000400595 1711 ntBASIC14.34□□□□□ -0.11
EPHA4P54764 AC004899.1-201ENST00000424687 1714 ntBASIC14.34□□□□□ -0.11
EPHA4P54764 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EPHA4P54764 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EPHA4P54764 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.34□□□□□ -0.11
EPHA4P54764 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms