Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.08□□□□□ -0.16
SMSP52788 BCRP7-201ENST00000511549 544 ntBASIC14.08□□□□□ -0.16
SMSP52788 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 AC079316.1-201ENST00000548397 411 ntBASIC14.08□□□□□ -0.16
SMSP52788 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.08□□□□□ -0.16
SMSP52788 AC009486.1-201ENST00000569860 813 ntBASIC14.08□□□□□ -0.16
SMSP52788 AC103810.3-201ENST00000583567 96 ntBASIC14.08□□□□□ -0.16
SMSP52788 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.08□□□□□ -0.16
SMSP52788 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.08□□□□□ -0.16
SMSP52788 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 LINC01115-203ENST00000606068 577 ntBASIC14.08□□□□□ -0.16
SMSP52788 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.08□□□□□ -0.16
SMSP52788 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.08□□□□□ -0.16
SMSP52788 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 AC138969.2-201ENST00000532739 9932 ntBASIC14.08□□□□□ -0.16
SMSP52788 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.08□□□□□ -0.16
SMSP52788 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.08□□□□□ -0.16
SMSP52788 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.08□□□□□ -0.16
SMSP52788 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMSP52788 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SMSP52788 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.08□□□□□ -0.16
SMSP52788 AP000845.1-201ENST00000581677 2131 ntBASIC14.08□□□□□ -0.16
SMSP52788 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 AC107918.4-201ENST00000641966 3141 ntBASIC14.07□□□□□ -0.16
SMSP52788 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SMSP52788 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 RPL7P3-201ENST00000441388 714 ntBASIC14.07□□□□□ -0.16
SMSP52788 CSF2RBP1-201ENST00000447905 391 ntBASIC14.07□□□□□ -0.16
SMSP52788 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 AC068587.3-201ENST00000526613 355 ntBASIC14.07□□□□□ -0.16
SMSP52788 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.07□□□□□ -0.16
SMSP52788 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 AC005840.4-201ENST00000541242 2494 ntBASIC14.07□□□□□ -0.16
SMSP52788 AC093525.8-201ENST00000624099 1342 ntBASIC14.07□□□□□ -0.16
SMSP52788 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.07□□□□□ -0.16
SMSP52788 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMSP52788 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.07□□□□□ -0.16
SMSP52788 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SMSP52788 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMSP52788 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMSP52788 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms