Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 MST1P2-201ENST00000457982 2291 ntBASIC14.35□□□□□ -0.11
HLCSP50747 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.35□□□□□ -0.11
HLCSP50747 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.35□□□□□ -0.11
HLCSP50747 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLCSP50747 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HLCSP50747 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HLCSP50747 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 AC112492.5-201ENST00000421897 457 ntBASIC14.34□□□□□ -0.11
HLCSP50747 TMEM14DP-201ENST00000422205 345 ntBASIC14.34□□□□□ -0.11
HLCSP50747 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 ACTG1P3-201ENST00000431775 1114 ntBASIC14.34□□□□□ -0.11
HLCSP50747 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.34□□□□□ -0.11
HLCSP50747 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 HILS1-202ENST00000545329 423 ntBASIC14.34□□□□□ -0.11
HLCSP50747 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.34□□□□□ -0.11
HLCSP50747 AC008735.3-201ENST00000596646 500 ntBASIC14.34□□□□□ -0.11
HLCSP50747 AL008721.1-201ENST00000609964 604 ntBASIC14.34□□□□□ -0.11
HLCSP50747 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 AC027612.1-201ENST00000445234 2395 ntBASIC14.34□□□□□ -0.11
HLCSP50747 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
HLCSP50747 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HLCSP50747 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLCSP50747 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HLCSP50747 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLCSP50747 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLCSP50747 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLCSP50747 AC015802.1-201ENST00000588104 1449 ntBASIC14.33□□□□□ -0.11
HLCSP50747 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HLCSP50747 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
HLCSP50747 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
HLCSP50747 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
HLCSP50747 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.33□□□□□ -0.12
HLCSP50747 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.33□□□□□ -0.12
HLCSP50747 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 AC079776.1-201ENST00000401540 1152 ntBASIC14.33□□□□□ -0.12
HLCSP50747 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.33□□□□□ -0.12
HLCSP50747 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 ACA64.2-201ENST00000459014 129 ntBASIC14.33□□□□□ -0.12
HLCSP50747 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.33□□□□□ -0.12
HLCSP50747 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.33□□□□□ -0.12
HLCSP50747 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 AC026410.3-201ENST00000514280 936 ntBASIC14.33□□□□□ -0.12
HLCSP50747 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.33□□□□□ -0.12
HLCSP50747 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms