Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 AC015656.1-201ENST00000624209 3578 ntBASIC13.33□□□□□ -0.28
CSNK1A1P48729 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 C8orf49-201ENST00000525043 1968 ntBASIC13.33□□□□□ -0.28
CSNK1A1P48729 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 AC007969.1-201ENST00000433675 447 ntBASIC13.33□□□□□ -0.28
CSNK1A1P48729 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 AC245100.3-201ENST00000441281 285 ntBASIC13.33□□□□□ -0.28
CSNK1A1P48729 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 FO681548.1-201ENST00000455617 1132 ntBASIC13.33□□□□□ -0.28
CSNK1A1P48729 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 AP001889.1-201ENST00000525414 633 ntBASIC13.33□□□□□ -0.28
CSNK1A1P48729 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.33□□□□□ -0.28
CSNK1A1P48729 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSNK1A1P48729 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 AC023908.3-201ENST00000564211 3047 ntBASIC13.32□□□□□ -0.28
CSNK1A1P48729 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 KRT17P7-201ENST00000451704 1104 ntBASIC13.32□□□□□ -0.28
CSNK1A1P48729 AC106760.1-201ENST00000508690 800 ntBASIC13.32□□□□□ -0.28
CSNK1A1P48729 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.32□□□□□ -0.28
CSNK1A1P48729 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSNK1A1P48729 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms