Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 REXO1L2P-201ENST00000425429 2069 ntBASIC15.32■□□□□ 0.04
GRIA4P48058 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GRIA4P48058 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
GRIA4P48058 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIA4P48058 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIA4P48058 AC078819.1-201ENST00000547454 765 ntBASIC15.32■□□□□ 0.04
GRIA4P48058 AC012085.1-201ENST00000548270 765 ntBASIC15.32■□□□□ 0.04
GRIA4P48058 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.32■□□□□ 0.04
GRIA4P48058 AC012183.1-201ENST00000625197 499 ntBASIC15.32■□□□□ 0.04
GRIA4P48058 AL139099.5-201ENST00000635274 300 ntBASIC15.32■□□□□ 0.04
GRIA4P48058 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 LILRP1-201ENST00000444199 1370 ntBASIC15.32■□□□□ 0.04
GRIA4P48058 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIA4P48058 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
GRIA4P48058 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIA4P48058 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GRIA4P48058 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 AC140479.7-201ENST00000636301 2332 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 MIR326-201ENST00000362220 95 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIA4P48058 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIA4P48058 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.31■□□□□ 0.04
GRIA4P48058 C2orf69P2-201ENST00000562032 1123 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIA4P48058 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.31■□□□□ 0.04
GRIA4P48058 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIA4P48058 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 AC145423.3-201ENST00000615987 467 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 AHCYP2-201ENST00000430630 1300 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 LRRC59-203ENST00000576448 1531 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.31■□□□□ 0.04
GRIA4P48058 AL138709.1-201ENST00000614840 1693 ntBASIC15.31■□□□□ 0.04
GRIA4P48058 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA4P48058 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA4P48058 AC139749.1-202ENST00000617529 3139 ntBASIC15.3■□□□□ 0.04
GRIA4P48058 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GRIA4P48058 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA4P48058 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GRIA4P48058 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms