Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC5P40937 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 E2F3P2-201ENST00000447755 1422 ntBASIC16.44■□□□□ 0.22
RFC5P40937 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 AC104581.4-201ENST00000623126 3052 ntBASIC16.44■□□□□ 0.22
RFC5P40937 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 MRPL37P1-201ENST00000592451 1337 ntBASIC16.44■□□□□ 0.22
RFC5P40937 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC5P40937 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 AC018442.1-201ENST00000421439 2061 ntBASIC16.43■□□□□ 0.22
RFC5P40937 PKD1P5-201ENST00000532415 10291 ntBASIC16.43■□□□□ 0.22
RFC5P40937 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 GPAA1P2-201ENST00000417923 928 ntBASIC16.43■□□□□ 0.22
RFC5P40937 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC5P40937 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.43■□□□□ 0.22
RFC5P40937 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC5P40937 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC5P40937 AL035414.1-201ENST00000451327 857 ntBASIC16.43■□□□□ 0.22
RFC5P40937 TUBB8P8-201ENST00000458717 1058 ntBASIC16.43■□□□□ 0.22
RFC5P40937 AC021723.1-201ENST00000486306 515 ntBASIC16.43■□□□□ 0.22
RFC5P40937 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.43■□□□□ 0.22
RFC5P40937 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.43■□□□□ 0.22
RFC5P40937 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RFC5P40937 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RFC5P40937 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.43■□□□□ 0.22
RFC5P40937 MIR4783-201ENST00000580343 82 ntBASIC16.43■□□□□ 0.22
RFC5P40937 MIR6787-201ENST00000616675 61 ntBASIC16.43■□□□□ 0.22
RFC5P40937 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.43■□□□□ 0.22
RFC5P40937 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC5P40937 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.43■□□□□ 0.22
RFC5P40937 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 CICP23-201ENST00000605013 2741 ntBASIC16.43■□□□□ 0.22
RFC5P40937 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RFC5P40937 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RFC5P40937 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC5P40937 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 AC092135.3-201ENST00000624151 1846 ntBASIC16.42■□□□□ 0.22
RFC5P40937 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC5P40937 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC5P40937 AL136172.1-201ENST00000598590 1394 ntBASIC16.42■□□□□ 0.22
RFC5P40937 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
RFC5P40937 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC5P40937 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.42■□□□□ 0.22
RFC5P40937 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 AC099548.2-209ENST00000480264 625 ntBASIC16.42■□□□□ 0.22
RFC5P40937 AC091804.1-201ENST00000486888 567 ntBASIC16.42■□□□□ 0.22
RFC5P40937 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.42■□□□□ 0.22
RFC5P40937 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC5P40937 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.42■□□□□ 0.22
RFC5P40937 AC027601.3-201ENST00000622907 509 ntBASIC16.42■□□□□ 0.22
RFC5P40937 GPR182-203ENST00000622922 591 ntBASIC16.42■□□□□ 0.22
RFC5P40937 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC5P40937 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC5P40937 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC5P40937 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC5P40937 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms