Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.7■□□□□ 0.74
USP6P35125 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.7■□□□□ 0.74
USP6P35125 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.7■□□□□ 0.74
USP6P35125 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP6P35125 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
USP6P35125 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP6P35125 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.69■□□□□ 0.74
USP6P35125 Z69890.1-201ENST00000382990 339 ntBASIC19.69■□□□□ 0.74
USP6P35125 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
USP6P35125 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC19.69■□□□□ 0.74
USP6P35125 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC19.69■□□□□ 0.74
USP6P35125 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
USP6P35125 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC19.69■□□□□ 0.74
USP6P35125 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6P35125 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 LAP3P2-201ENST00000454686 1454 ntBASIC19.69■□□□□ 0.74
USP6P35125 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.69■□□□□ 0.74
USP6P35125 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
USP6P35125 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6P35125 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6P35125 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 AC022532.1-201ENST00000624563 1728 ntBASIC19.69■□□□□ 0.74
USP6P35125 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
USP6P35125 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6P35125 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6P35125 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
USP6P35125 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP6P35125 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC19.68■□□□□ 0.74
USP6P35125 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.68■□□□□ 0.74
USP6P35125 RPL18AP8-201ENST00000486071 528 ntBASIC19.68■□□□□ 0.74
USP6P35125 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19.68■□□□□ 0.74
USP6P35125 RN7SL665P-201ENST00000578793 300 ntBASIC19.68■□□□□ 0.74
USP6P35125 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.68■□□□□ 0.74
USP6P35125 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 AC090340.1-201ENST00000620778 4980 ntBASIC19.68■□□□□ 0.74
USP6P35125 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP6P35125 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP6P35125 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
USP6P35125 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
USP6P35125 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6P35125 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.68■□□□□ 0.74
USP6P35125 ERP29P1-201ENST00000442902 706 ntBASIC19.68■□□□□ 0.74
USP6P35125 CR383656.3-201ENST00000551315 183 ntBASIC19.68■□□□□ 0.74
USP6P35125 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.68■□□□□ 0.74
USP6P35125 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.68■□□□□ 0.74
USP6P35125 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6P35125 RN7SL470P-201ENST00000583069 259 ntBASIC19.68■□□□□ 0.74
USP6P35125 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.68■□□□□ 0.74
USP6P35125 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.68■□□□□ 0.74
USP6P35125 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms