Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.4■□□□□ 0.22
CTGFP29279 HLA-DPA2-205ENST00000433582 733 ntBASIC16.4■□□□□ 0.22
CTGFP29279 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.4■□□□□ 0.22
CTGFP29279 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.4■□□□□ 0.22
CTGFP29279 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.4■□□□□ 0.22
CTGFP29279 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.4■□□□□ 0.22
CTGFP29279 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.4■□□□□ 0.22
CTGFP29279 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CTGFP29279 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.4■□□□□ 0.22
CTGFP29279 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 ENPP7P8-202ENST00000527856 1345 ntBASIC16.4■□□□□ 0.22
CTGFP29279 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CTGFP29279 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CTGFP29279 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.4■□□□□ 0.22
CTGFP29279 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.4■□□□□ 0.22
CTGFP29279 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.4■□□□□ 0.22
CTGFP29279 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 KHSRPP1-201ENST00000427983 1768 ntBASIC16.39■□□□□ 0.21
CTGFP29279 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.39■□□□□ 0.21
CTGFP29279 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.39■□□□□ 0.21
CTGFP29279 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.39■□□□□ 0.21
CTGFP29279 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.39■□□□□ 0.21
CTGFP29279 AC083801.1-201ENST00000491689 358 ntBASIC16.39■□□□□ 0.21
CTGFP29279 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 AC013553.1-201ENST00000560906 267 ntBASIC16.39■□□□□ 0.21
CTGFP29279 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.39■□□□□ 0.21
CTGFP29279 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.39■□□□□ 0.21
CTGFP29279 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CTGFP29279 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTGFP29279 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTGFP29279 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.39■□□□□ 0.21
CTGFP29279 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTGFP29279 FUCA1P1-201ENST00000374476 1351 ntBASIC16.38■□□□□ 0.21
CTGFP29279 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.38■□□□□ 0.21
CTGFP29279 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.38■□□□□ 0.21
CTGFP29279 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CTGFP29279 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTGFP29279 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CTGFP29279 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CTGFP29279 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.38■□□□□ 0.21
CTGFP29279 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CTGFP29279 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.38■□□□□ 0.21
CTGFP29279 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.38■□□□□ 0.21
CTGFP29279 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.38■□□□□ 0.21
CTGFP29279 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.38■□□□□ 0.21
CTGFP29279 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 AC008972.2-201ENST00000606587 494 ntBASIC16.38■□□□□ 0.21
CTGFP29279 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.38■□□□□ 0.21
CTGFP29279 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CTGFP29279 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.38■□□□□ 0.21
CTGFP29279 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTGFP29279 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms