Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL354989.2-201ENST00000435838 1540 ntBASIC12.83□□□□□ -0.35
TNFSF4P23510 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 CD8B2-202ENST00000417670 633 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 ARSEP1-201ENST00000420443 635 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.83□□□□□ -0.36
TNFSF4P23510 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.83□□□□□ -0.36
TNFSF4P23510 CTBP2P5-201ENST00000454986 1264 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 CROCCP4-201ENST00000457096 498 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.83□□□□□ -0.36
TNFSF4P23510 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 AC023310.1-201ENST00000554836 735 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.83□□□□□ -0.36
TNFSF4P23510 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 CICP14-201ENST00000629111 2732 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TNFSF4P23510 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 AL359258.3-201ENST00000622910 2331 ntBASIC12.83□□□□□ -0.36
TNFSF4P23510 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.83□□□□□ -0.36
TNFSF4P23510 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.83□□□□□ -0.36
TNFSF4P23510 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TNFSF4P23510 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.82□□□□□ -0.36
TNFSF4P23510 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.82□□□□□ -0.36
TNFSF4P23510 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.82□□□□□ -0.36
TNFSF4P23510 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TNFSF4P23510 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.82□□□□□ -0.36
TNFSF4P23510 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
TNFSF4P23510 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.82□□□□□ -0.36
TNFSF4P23510 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 FTLP10-202ENST00000505798 471 ntBASIC12.82□□□□□ -0.36
TNFSF4P23510 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.82□□□□□ -0.36
TNFSF4P23510 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 AP000812.2-201ENST00000538934 718 ntBASIC12.82□□□□□ -0.36
TNFSF4P23510 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.82□□□□□ -0.36
TNFSF4P23510 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.82□□□□□ -0.36
TNFSF4P23510 GNRHR2-203ENST00000581100 1187 ntBASIC12.82□□□□□ -0.36
TNFSF4P23510 AL359881.2-201ENST00000602973 570 ntBASIC12.82□□□□□ -0.36
TNFSF4P23510 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.82□□□□□ -0.36
TNFSF4P23510 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.82□□□□□ -0.36
TNFSF4P23510 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TNFSF4P23510 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.82□□□□□ -0.36
TNFSF4P23510 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TNFSF4P23510 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms