Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KCNA3P22001 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.91■□□□□ 0.46
KCNA3P22001 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.91■□□□□ 0.46
KCNA3P22001 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNA3P22001 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 NKILA-202ENST00000614771 2598 ntBASIC17.9■□□□□ 0.46
KCNA3P22001 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.9■□□□□ 0.46
KCNA3P22001 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KCNA3P22001 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.9■□□□□ 0.46
KCNA3P22001 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 OR51A9P-201ENST00000422578 911 ntBASIC17.9■□□□□ 0.46
KCNA3P22001 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNA3P22001 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.9■□□□□ 0.46
KCNA3P22001 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.9■□□□□ 0.46
KCNA3P22001 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.9■□□□□ 0.46
KCNA3P22001 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.9■□□□□ 0.46
KCNA3P22001 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNA3P22001 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.9■□□□□ 0.46
KCNA3P22001 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.9■□□□□ 0.46
KCNA3P22001 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
KCNA3P22001 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.9■□□□□ 0.46
KCNA3P22001 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNA3P22001 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNA3P22001 BRD7P5-201ENST00000299197 1822 ntBASIC17.9■□□□□ 0.46
KCNA3P22001 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
KCNA3P22001 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.9■□□□□ 0.46
KCNA3P22001 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNA3P22001 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.9■□□□□ 0.46
KCNA3P22001 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNA3P22001 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.9■□□□□ 0.46
KCNA3P22001 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNA3P22001 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KCNA3P22001 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
KCNA3P22001 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
KCNA3P22001 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
KCNA3P22001 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.89■□□□□ 0.45
KCNA3P22001 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 PTGER4P2-201ENST00000328411 252 ntBASIC17.89■□□□□ 0.45
KCNA3P22001 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
KCNA3P22001 MIR1301-201ENST00000408518 82 ntBASIC17.89■□□□□ 0.45
KCNA3P22001 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.89■□□□□ 0.45
KCNA3P22001 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.89■□□□□ 0.45
KCNA3P22001 PTGER4P3-201ENST00000458150 252 ntBASIC17.89■□□□□ 0.45
KCNA3P22001 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.89■□□□□ 0.45
KCNA3P22001 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.89■□□□□ 0.45
KCNA3P22001 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 AC010976.2-201ENST00000609697 852 ntBASIC17.89■□□□□ 0.45
KCNA3P22001 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.89■□□□□ 0.45
KCNA3P22001 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 TEKT4P2-202ENST00000559466 1312 ntBASIC17.89■□□□□ 0.45
KCNA3P22001 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.89■□□□□ 0.45
KCNA3P22001 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
KCNA3P22001 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNA3P22001 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNA3P22001 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNA3P22001 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
KCNA3P22001 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNA3P22001 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.88■□□□□ 0.45
KCNA3P22001 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
KCNA3P22001 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNA3P22001 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNA3P22001 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms