Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATF3P18847 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATF3P18847 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.07■□□□□ 0.8
ATF3P18847 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATF3P18847 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ATF3P18847 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATF3P18847 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATF3P18847 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ATF3P18847 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ATF3P18847 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.06■□□□□ 0.8
ATF3P18847 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 AC090616.6-203ENST00000579186 1945 ntBASIC20.06■□□□□ 0.8
ATF3P18847 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
ATF3P18847 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC20.06■□□□□ 0.8
ATF3P18847 IGHEP1-201ENST00000521393 651 ntBASIC20.06■□□□□ 0.8
ATF3P18847 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.06■□□□□ 0.8
ATF3P18847 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATF3P18847 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.06■□□□□ 0.8
ATF3P18847 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.06■□□□□ 0.8
ATF3P18847 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATF3P18847 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC20.05■□□□□ 0.8
ATF3P18847 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.05■□□□□ 0.8
ATF3P18847 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.05■□□□□ 0.8
ATF3P18847 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 RNVU1-8-201ENST00000364272 125 ntBASIC20.05■□□□□ 0.8
ATF3P18847 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC20.05■□□□□ 0.8
ATF3P18847 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 AF274858.1-201ENST00000406288 372 ntBASIC20.05■□□□□ 0.8
ATF3P18847 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC20.05■□□□□ 0.8
ATF3P18847 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.05■□□□□ 0.8
ATF3P18847 AC092580.1-201ENST00000433998 658 ntBASIC20.05■□□□□ 0.8
ATF3P18847 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.05■□□□□ 0.8
ATF3P18847 BPIFB5P-201ENST00000457066 1099 ntBASIC20.05■□□□□ 0.8
ATF3P18847 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATF3P18847 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC20.05■□□□□ 0.8
ATF3P18847 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.05■□□□□ 0.8
ATF3P18847 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.05■□□□□ 0.8
ATF3P18847 AL591471.1-201ENST00000621855 229 ntBASIC20.05■□□□□ 0.8
ATF3P18847 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.05■□□□□ 0.8
ATF3P18847 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.05■□□□□ 0.8
ATF3P18847 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 FUCA1P1-201ENST00000374476 1351 ntBASIC20.05■□□□□ 0.8
ATF3P18847 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ATF3P18847 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.05■□□□□ 0.8
ATF3P18847 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATF3P18847 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATF3P18847 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATF3P18847 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.04■□□□□ 0.8
ATF3P18847 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATF3P18847 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC20.04■□□□□ 0.8
ATF3P18847 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.04■□□□□ 0.8
ATF3P18847 AL929302.1-201ENST00000426556 871 ntBASIC20.04■□□□□ 0.8
ATF3P18847 AC023141.7-201ENST00000430646 407 ntBASIC20.04■□□□□ 0.8
ATF3P18847 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATF3P18847 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.04■□□□□ 0.8
ATF3P18847 RN7SL564P-201ENST00000496309 250 ntBASIC20.04■□□□□ 0.8
ATF3P18847 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.04■□□□□ 0.8
ATF3P18847 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC20.04■□□□□ 0.8
ATF3P18847 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.04■□□□□ 0.8
ATF3P18847 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC20.04■□□□□ 0.8
ATF3P18847 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATF3P18847 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms