Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.3■□□□□ 0.04
MT-ND3P03897 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.3■□□□□ 0.04
MT-ND3P03897 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.3■□□□□ 0.04
MT-ND3P03897 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MT-ND3P03897 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND3P03897 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.3■□□□□ 0.04
MT-ND3P03897 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MT-ND3P03897 AC114501.2-201ENST00000439631 535 ntBASIC15.3■□□□□ 0.04
MT-ND3P03897 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.3■□□□□ 0.04
MT-ND3P03897 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.3■□□□□ 0.04
MT-ND3P03897 TPT1P11-201ENST00000458482 498 ntBASIC15.3■□□□□ 0.04
MT-ND3P03897 KRT18P43-201ENST00000469825 1281 ntBASIC15.3■□□□□ 0.04
MT-ND3P03897 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.3■□□□□ 0.04
MT-ND3P03897 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.3■□□□□ 0.04
MT-ND3P03897 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.3■□□□□ 0.04
MT-ND3P03897 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.3■□□□□ 0.04
MT-ND3P03897 AL512361.1-201ENST00000554200 418 ntBASIC15.3■□□□□ 0.04
MT-ND3P03897 AC104794.3-201ENST00000566840 1248 ntBASIC15.3■□□□□ 0.04
MT-ND3P03897 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.3■□□□□ 0.04
MT-ND3P03897 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.3■□□□□ 0.04
MT-ND3P03897 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND3P03897 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.3■□□□□ 0.04
MT-ND3P03897 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MT-ND3P03897 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 AC055811.4-201ENST00000624039 1754 ntBASIC15.3■□□□□ 0.04
MT-ND3P03897 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MT-ND3P03897 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND3P03897 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 AL359881.3-201ENST00000602640 1721 ntBASIC15.29■□□□□ 0.04
MT-ND3P03897 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 AL121723.1-201ENST00000445194 1519 ntBASIC15.29■□□□□ 0.04
MT-ND3P03897 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.29■□□□□ 0.04
MT-ND3P03897 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.29■□□□□ 0.04
MT-ND3P03897 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 API5-211ENST00000534695 560 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
MT-ND3P03897 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND3P03897 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.29■□□□□ 0.04
MT-ND3P03897 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND3P03897 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND3P03897 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms