Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SSR4P1-203ENST00000599569 2260 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 AC092135.3-201ENST00000624151 1846 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.8■□□□□ 0.12
TIMP1P01033 MROH4P-201ENST00000431302 1578 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.8■□□□□ 0.12
TIMP1P01033 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.8■□□□□ 0.12
TIMP1P01033 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TIMP1P01033 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.8■□□□□ 0.12
TIMP1P01033 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.8■□□□□ 0.12
TIMP1P01033 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
TIMP1P01033 ACTG1P19-201ENST00000418987 1116 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 AC092580.1-201ENST00000433998 658 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.8■□□□□ 0.12
TIMP1P01033 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.8■□□□□ 0.12
TIMP1P01033 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TIMP1P01033 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 AL118522.1-201ENST00000611368 560 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.8■□□□□ 0.12
TIMP1P01033 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.8■□□□□ 0.12
TIMP1P01033 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
TIMP1P01033 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TIMP1P01033 AC139712.1-201ENST00000378256 1875 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMP1P01033 LINC01101-201ENST00000622953 1884 ntBASIC15.8■□□□□ 0.12
TIMP1P01033 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.8■□□□□ 0.12
TIMP1P01033 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TIMP1P01033 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMP1P01033 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.79■□□□□ 0.12
TIMP1P01033 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TIMP1P01033 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 WASH3P-207ENST00000560956 1394 ntBASIC15.79■□□□□ 0.12
TIMP1P01033 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TIMP1P01033 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.79■□□□□ 0.12
TIMP1P01033 OR51A9P-201ENST00000422578 911 ntBASIC15.79■□□□□ 0.12
TIMP1P01033 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.79■□□□□ 0.12
TIMP1P01033 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.79■□□□□ 0.12
TIMP1P01033 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.79■□□□□ 0.12
TIMP1P01033 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TIMP1P01033 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMP1P01033 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TIMP1P01033 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TIMP1P01033 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.79■□□□□ 0.12
TIMP1P01033 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms