Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MBD4O95243 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 KRT8P29-201ENST00000420409 1371 ntBASIC17.72■□□□□ 0.43
MBD4O95243 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.72■□□□□ 0.43
MBD4O95243 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.72■□□□□ 0.43
MBD4O95243 AC004898.1-201ENST00000451057 766 ntBASIC17.72■□□□□ 0.43
MBD4O95243 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.72■□□□□ 0.43
MBD4O95243 AC126915.1-201ENST00000522847 1038 ntBASIC17.72■□□□□ 0.43
MBD4O95243 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
MBD4O95243 AP001258.2-201ENST00000529891 490 ntBASIC17.72■□□□□ 0.43
MBD4O95243 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.72■□□□□ 0.43
MBD4O95243 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.72■□□□□ 0.43
MBD4O95243 MIR3615-201ENST00000581999 87 ntBASIC17.72■□□□□ 0.43
MBD4O95243 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 AC022748.3-201ENST00000621828 275 ntBASIC17.72■□□□□ 0.43
MBD4O95243 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MBD4O95243 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD4O95243 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
MBD4O95243 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
MBD4O95243 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.71■□□□□ 0.43
MBD4O95243 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MBD4O95243 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
MBD4O95243 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 AC044849.1-201ENST00000519737 1188 ntBASIC17.71■□□□□ 0.43
MBD4O95243 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.71■□□□□ 0.43
MBD4O95243 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MBD4O95243 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.71■□□□□ 0.43
MBD4O95243 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD4O95243 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.71■□□□□ 0.43
MBD4O95243 AL451050.2-201ENST00000606967 682 ntBASIC17.71■□□□□ 0.43
MBD4O95243 AC027601.3-201ENST00000622907 509 ntBASIC17.71■□□□□ 0.43
MBD4O95243 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 CICP24-201ENST00000605464 2705 ntBASIC17.71■□□□□ 0.43
MBD4O95243 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD4O95243 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD4O95243 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
MBD4O95243 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD4O95243 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.71■□□□□ 0.42
MBD4O95243 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
MBD4O95243 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MBD4O95243 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.7■□□□□ 0.42
MBD4O95243 SERPINA13P-202ENST00000478994 924 ntBASIC17.7■□□□□ 0.42
MBD4O95243 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.7■□□□□ 0.42
MBD4O95243 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.7■□□□□ 0.42
MBD4O95243 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.7■□□□□ 0.42
MBD4O95243 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.7■□□□□ 0.42
MBD4O95243 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
MBD4O95243 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MBD4O95243 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MBD4O95243 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
MBD4O95243 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MBD4O95243 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms