Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
SNX4O95219 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX4O95219 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SNX4O95219 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SNX4O95219 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SNX4O95219 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.14□□□□□ -0.15
SNX4O95219 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.14□□□□□ -0.15
SNX4O95219 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.14□□□□□ -0.15
SNX4O95219 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.14□□□□□ -0.15
SNX4O95219 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.14□□□□□ -0.15
SNX4O95219 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 AP001063.1-201ENST00000568332 529 ntBASIC14.14□□□□□ -0.15
SNX4O95219 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX4O95219 AC132938.2-201ENST00000579188 680 ntBASIC14.14□□□□□ -0.15
SNX4O95219 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX4O95219 AC107373.2-201ENST00000607735 490 ntBASIC14.14□□□□□ -0.15
SNX4O95219 IGHV3-72-202ENST00000621503 303 ntBASIC14.14□□□□□ -0.15
SNX4O95219 AL591163.1-201ENST00000641757 987 ntBASIC14.14□□□□□ -0.15
SNX4O95219 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX4O95219 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
SNX4O95219 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.14□□□□□ -0.15
SNX4O95219 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.14□□□□□ -0.15
SNX4O95219 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNX4O95219 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.13□□□□□ -0.15
SNX4O95219 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.13□□□□□ -0.15
SNX4O95219 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 ACKR1-201ENST00000368121 1240 ntBASIC14.13□□□□□ -0.15
SNX4O95219 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SNX4O95219 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.13□□□□□ -0.15
SNX4O95219 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
SNX4O95219 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.13□□□□□ -0.15
SNX4O95219 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.13□□□□□ -0.15
SNX4O95219 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.13□□□□□ -0.15
SNX4O95219 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SNX4O95219 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.13□□□□□ -0.15
SNX4O95219 AC010319.3-201ENST00000597028 470 ntBASIC14.13□□□□□ -0.15
SNX4O95219 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.13□□□□□ -0.15
SNX4O95219 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SNX4O95219 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SNX4O95219 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SNX4O95219 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SNX4O95219 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms