Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.31□□□□□ -0.44
CLN5O75503 CSPG4P11-201ENST00000560634 4910 ntBASIC12.31□□□□□ -0.44
CLN5O75503 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.31□□□□□ -0.44
CLN5O75503 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.31□□□□□ -0.44
CLN5O75503 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.31□□□□□ -0.44
CLN5O75503 AC136604.1-201ENST00000418535 575 ntBASIC12.31□□□□□ -0.44
CLN5O75503 KRT18P32-201ENST00000424695 1287 ntBASIC12.31□□□□□ -0.44
CLN5O75503 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 DNAJB3-201ENST00000446806 729 ntBASIC12.31□□□□□ -0.44
CLN5O75503 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.31□□□□□ -0.44
CLN5O75503 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.31□□□□□ -0.44
CLN5O75503 ALG1L8P-201ENST00000533887 760 ntBASIC12.31□□□□□ -0.44
CLN5O75503 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.31□□□□□ -0.44
CLN5O75503 AC005829.1-201ENST00000570002 483 ntBASIC12.31□□□□□ -0.44
CLN5O75503 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.31□□□□□ -0.44
CLN5O75503 AC022145.2-201ENST00000598203 171 ntBASIC12.31□□□□□ -0.44
CLN5O75503 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CLN5O75503 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CLN5O75503 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 INTS4P1-203ENST00000641008 3683 ntBASIC12.31□□□□□ -0.44
CLN5O75503 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLN5O75503 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.31□□□□□ -0.44
CLN5O75503 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CLN5O75503 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN5O75503 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN5O75503 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN5O75503 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CLN5O75503 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN5O75503 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CLN5O75503 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.3□□□□□ -0.44
CLN5O75503 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.3□□□□□ -0.44
CLN5O75503 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.3□□□□□ -0.44
CLN5O75503 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CLN5O75503 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CLN5O75503 AZGP1P1-201ENST00000411909 902 ntBASIC12.3□□□□□ -0.44
CLN5O75503 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.3□□□□□ -0.44
CLN5O75503 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
CLN5O75503 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN5O75503 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.3□□□□□ -0.44
CLN5O75503 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.3□□□□□ -0.44
CLN5O75503 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN5O75503 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CLN5O75503 AC105021.1-202ENST00000570572 669 ntBASIC12.3□□□□□ -0.44
CLN5O75503 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.3□□□□□ -0.44
CLN5O75503 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.3□□□□□ -0.44
CLN5O75503 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.3□□□□□ -0.44
CLN5O75503 AC018529.1-201ENST00000613063 361 ntBASIC12.3□□□□□ -0.44
CLN5O75503 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN5O75503 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms