Protein–RNA interactions for Protein: O43741

PRKAB2, 5'-AMP-activated protein kinase subunit beta-2, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB2O43741 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKAB2O43741 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.62■□□□□ 0.41
PRKAB2O43741 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PRKAB2O43741 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.62■□□□□ 0.41
PRKAB2O43741 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PRKAB2O43741 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PRKAB2O43741 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKAB2O43741 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.61■□□□□ 0.41
PRKAB2O43741 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRKAB2O43741 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRKAB2O43741 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PRKAB2O43741 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 VDAC1P1-201ENST00000439229 848 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 AL645933.1-201ENST00000440087 609 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 BX284668.4-201ENST00000453917 508 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.61■□□□□ 0.41
PRKAB2O43741 AC091804.1-201ENST00000486888 567 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 AC103988.2-201ENST00000561804 725 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRKAB2O43741 AC103810.3-201ENST00000583567 96 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 MIR6720-201ENST00000611664 98 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 AL023803.2-201ENST00000620080 638 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 AL139099.5-201ENST00000635274 300 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 AC068587.8-201ENST00000641239 219 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 AL008718.2-201ENST00000609206 1313 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.61■□□□□ 0.41
PRKAB2O43741 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.61■□□□□ 0.41
PRKAB2O43741 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRKAB2O43741 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.61■□□□□ 0.41
PRKAB2O43741 AL590440.2-201ENST00000641973 1595 ntBASIC17.61■□□□□ 0.41
PRKAB2O43741 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.61■□□□□ 0.41
PRKAB2O43741 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.61■□□□□ 0.41
PRKAB2O43741 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKAB2O43741 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.6■□□□□ 0.41
PRKAB2O43741 AL354702.1-201ENST00000442006 1960 ntBASIC17.6■□□□□ 0.41
PRKAB2O43741 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.6■□□□□ 0.41
PRKAB2O43741 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.6■□□□□ 0.41
PRKAB2O43741 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.6■□□□□ 0.41
PRKAB2O43741 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
PRKAB2O43741 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.6■□□□□ 0.41
PRKAB2O43741 AL157407.1-201ENST00000435784 904 ntBASIC17.6■□□□□ 0.41
PRKAB2O43741 TUBB8P8-201ENST00000458717 1058 ntBASIC17.6■□□□□ 0.41
PRKAB2O43741 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PRKAB2O43741 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PRKAB2O43741 AC007686.3-201ENST00000619017 3487 ntBASIC17.6■□□□□ 0.41
PRKAB2O43741 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKAB2O43741 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKAB2O43741 AC106881.1-201ENST00000605849 3329 ntBASIC17.59■□□□□ 0.41
PRKAB2O43741 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKAB2O43741 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.59■□□□□ 0.41
PRKAB2O43741 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRKAB2O43741 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRKAB2O43741 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms