Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFS4O43181 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NDUFS4O43181 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NDUFS4O43181 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 AC140479.7-201ENST00000636301 2332 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 MIR1909-201ENST00000411312 80 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 TLE1P1-201ENST00000422965 589 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 RPL7P3-201ENST00000441388 714 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 AP000812.2-201ENST00000538934 718 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.31□□□□□ -0.12
NDUFS4O43181 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 RHOXF1P1-202ENST00000635473 501 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 AC006453.4-201ENST00000636949 1252 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NDUFS4O43181 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.31□□□□□ -0.12
NDUFS4O43181 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NDUFS4O43181 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 AC003102.2-201ENST00000589195 1469 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
NDUFS4O43181 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFS4O43181 AC011840.2-201ENST00000563063 1520 ntBASIC14.31□□□□□ -0.12
NDUFS4O43181 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFS4O43181 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
NDUFS4O43181 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NDUFS4O43181 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.3□□□□□ -0.12
NDUFS4O43181 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFS4O43181 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFS4O43181 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NDUFS4O43181 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.3□□□□□ -0.12
NDUFS4O43181 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFS4O43181 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.3□□□□□ -0.12
NDUFS4O43181 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.3□□□□□ -0.12
NDUFS4O43181 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NDUFS4O43181 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFS4O43181 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms