Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
CLDN5O00501 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN5O00501 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.69■□□□□ 0.1
CLDN5O00501 AC010141.1-201ENST00000411585 623 ntBASIC15.69■□□□□ 0.1
CLDN5O00501 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN5O00501 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 FAM8A2P-201ENST00000528813 1142 ntBASIC15.69■□□□□ 0.1
CLDN5O00501 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN5O00501 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN5O00501 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CLDN5O00501 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN5O00501 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN5O00501 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN5O00501 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN5O00501 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN5O00501 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN5O00501 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.69■□□□□ 0.1
CLDN5O00501 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN5O00501 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN5O00501 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 AC099548.2-209ENST00000480264 625 ntBASIC15.68■□□□□ 0.1
CLDN5O00501 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.68■□□□□ 0.1
CLDN5O00501 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN5O00501 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN5O00501 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 AC009955.4-201ENST00000597192 544 ntBASIC15.68■□□□□ 0.1
CLDN5O00501 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN5O00501 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 MRPL37P1-201ENST00000592451 1337 ntBASIC15.68■□□□□ 0.1
CLDN5O00501 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN5O00501 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN5O00501 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN5O00501 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms