Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 MYADML-201ENST00000474610 2147 ntBASIC19.4■□□□□ 0.7
PIK3C2AO00443 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C2AO00443 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 AC012073.1-201ENST00000606114 1108 ntBASIC19.4■□□□□ 0.7
PIK3C2AO00443 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.4■□□□□ 0.7
PIK3C2AO00443 AC105917.1-201ENST00000506637 2539 ntBASIC19.4■□□□□ 0.7
PIK3C2AO00443 AC019109.1-201ENST00000401725 1874 ntBASIC19.39■□□□□ 0.7
PIK3C2AO00443 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.39■□□□□ 0.7
PIK3C2AO00443 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 AC018529.2-202ENST00000611482 3087 ntBASIC19.39■□□□□ 0.69
PIK3C2AO00443 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 LINC00554-201ENST00000564841 3011 ntBASIC19.39■□□□□ 0.69
PIK3C2AO00443 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C2AO00443 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PIK3C2AO00443 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 RNVU1-8-201ENST00000364272 125 ntBASIC19.38■□□□□ 0.69
PIK3C2AO00443 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC093826.1-201ENST00000508655 993 ntBASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC084752.1-201ENST00000509766 622 ntBASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC022447.6-201ENST00000515522 438 ntBASIC19.38■□□□□ 0.69
PIK3C2AO00443 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC007250.1-201ENST00000608934 338 ntBASIC19.38■□□□□ 0.69
PIK3C2AO00443 AL118522.1-201ENST00000611368 560 ntBASIC19.38■□□□□ 0.69
PIK3C2AO00443 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.38■□□□□ 0.69
PIK3C2AO00443 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C2AO00443 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PIK3C2AO00443 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PIK3C2AO00443 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.37■□□□□ 0.69
PIK3C2AO00443 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PIK3C2AO00443 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.37■□□□□ 0.69
PIK3C2AO00443 AC018638.5-201ENST00000450885 754 ntBASIC19.37■□□□□ 0.69
PIK3C2AO00443 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.37■□□□□ 0.69
PIK3C2AO00443 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PIK3C2AO00443 AL132994.1-201ENST00000554098 400 ntBASIC19.37■□□□□ 0.69
PIK3C2AO00443 MIR4472-1-201ENST00000584349 80 ntBASIC19.37■□□□□ 0.69
PIK3C2AO00443 AC244250.3-201ENST00000620749 366 ntBASIC19.37■□□□□ 0.69
PIK3C2AO00443 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.37■□□□□ 0.69
PIK3C2AO00443 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PIK3C2AO00443 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.37■□□□□ 0.69
PIK3C2AO00443 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PIK3C2AO00443 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PIK3C2AO00443 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PIK3C2AO00443 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PIK3C2AO00443 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms