Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AP000346.4-201ENST00000614827 381 ntBASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AL353726.2-201ENST00000623259 884 ntBASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 AC046158.3-201ENST00000624947 2558 ntBASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3BA6NDS4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 HINT2P1-201ENST00000419438 481 ntBASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 MAGEA5-201ENST00000446757 942 ntBASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 AL035414.1-201ENST00000451327 857 ntBASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 CICP12-201ENST00000455801 843 ntBASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 AC009779.1-201ENST00000551138 283 ntBASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 MIR3907-201ENST00000579424 151 ntBASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 AC136759.1-202ENST00000530858 2194 ntBASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3BA6NDS4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TBC1D3BA6NDS4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 ZBED1P1-201ENST00000502364 1930 ntBASIC15.08■□□□□ 0
TBC1D3BA6NDS4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 AC007274.2-201ENST00000421675 662 ntBASIC15.08■□□□□ 0
TBC1D3BA6NDS4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.08■□□□□ 0
TBC1D3BA6NDS4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms