Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC162PA2VCL2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC162PA2VCL2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 AC003102.2-201ENST00000589195 1469 ntBASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 AC007969.1-201ENST00000433675 447 ntBASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC162PA2VCL2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 AL512384.1-201ENST00000406683 331 ntBASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 POM121L8P-201ENST00000417732 1281 ntBASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 TMEM14DP-201ENST00000422205 345 ntBASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 AC245100.3-201ENST00000441281 285 ntBASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 POM121L9P-203ENST00000441984 1285 ntBASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 SLC25A47P1-201ENST00000531577 414 ntBASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC162PA2VCL2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC162PA2VCL2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC162PA2VCL2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC162PA2VCL2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC162PA2VCL2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC162PA2VCL2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC162PA2VCL2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms