Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 UPF3AP2-201ENST00000457924 1132 ntBASIC21.67■■□□□ 1.06
HFM1A2PYH4 IMP3P2-201ENST00000489760 475 ntBASIC21.67■■□□□ 1.06
HFM1A2PYH4 AC090857.1-201ENST00000527400 390 ntBASIC21.67■■□□□ 1.06
HFM1A2PYH4 AC005586.2-201ENST00000563946 837 ntBASIC21.67■■□□□ 1.06
HFM1A2PYH4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC21.67■■□□□ 1.06
HFM1A2PYH4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HFM1A2PYH4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HFM1A2PYH4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 AP002353.1-201ENST00000528257 1599 ntBASIC21.66■■□□□ 1.06
HFM1A2PYH4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 TSPY25P-201ENST00000429463 745 ntBASIC21.66■■□□□ 1.06
HFM1A2PYH4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 AC011498.7-201ENST00000624986 2027 ntBASIC21.66■■□□□ 1.06
HFM1A2PYH4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 LAP3P2-201ENST00000454686 1454 ntBASIC21.66■■□□□ 1.06
HFM1A2PYH4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HFM1A2PYH4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC21.66■■□□□ 1.06
HFM1A2PYH4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 AL353770.1-201ENST00000614915 403 ntBASIC21.65■■□□□ 1.06
HFM1A2PYH4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 RN7SL832P-201ENST00000607781 1756 ntBASIC21.65■■□□□ 1.06
HFM1A2PYH4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HFM1A2PYH4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HFM1A2PYH4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HFM1A2PYH4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HFM1A2PYH4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HFM1A2PYH4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 AC006335.1-201ENST00000445200 547 ntBASIC21.64■■□□□ 1.06
HFM1A2PYH4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HFM1A2PYH4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HFM1A2PYH4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HFM1A2PYH4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC21.64■■□□□ 1.06
HFM1A2PYH4 DBET-201ENST00000630918 3363 ntBASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms