Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AC092506.1-202ENST00000401022 528 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 SLC25A24P2-201ENST00000415059 510 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 FAM197Y7-201ENST00000432892 766 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 RNA5SP423-201ENST00000517127 109 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 MIR4741-201ENST00000579822 90 ntBASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHB1Q9Y5F3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 AC055811.4-201ENST00000624039 1754 ntBASIC14.96□□□□□ -0.02
PCDHB1Q9Y5F3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 KRT8P35-201ENST00000483942 1338 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC007969.1-201ENST00000433675 447 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 Z93015.1-201ENST00000451718 390 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC078819.1-201ENST00000547454 765 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC012085.1-201ENST00000548270 765 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC138951.2-201ENST00000623455 1161 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 AC018529.2-202ENST00000611482 3087 ntBASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHB1Q9Y5F3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms