Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRG3Q9Y2Y8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 CICP12-201ENST00000455801 843 ntBASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 HLA-J-204ENST00000495278 958 ntBASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 RN7SL190P-201ENST00000582519 257 ntBASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 MIR6720-201ENST00000611664 98 ntBASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 AC136759.1-202ENST00000530858 2194 ntBASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRG3Q9Y2Y8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AC138035.3-201ENST00000622706 2791 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AC090857.1-201ENST00000527400 390 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AL161670.2-201ENST00000557650 1227 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AC009884.2-201ENST00000603110 324 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AL132994.2-201ENST00000603120 687 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 AC027601.3-201ENST00000622907 509 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 Z98259.2-201ENST00000641583 609 ntBASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
PRG3Q9Y2Y8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms