Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 AC004466.1-201ENST00000599515 1080 ntBASIC15.24■□□□□ 0.03
EBF1Q9UH73 BNIP3P13-201ENST00000599968 566 ntBASIC15.24■□□□□ 0.03
EBF1Q9UH73 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 AC007191.1-201ENST00000623179 2995 ntBASIC15.24■□□□□ 0.03
EBF1Q9UH73 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 LINC00528-201ENST00000600723 2160 ntBASIC15.24■□□□□ 0.03
EBF1Q9UH73 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
EBF1Q9UH73 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
EBF1Q9UH73 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 AL109954.1-202ENST00000564051 2148 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 TUBB8P8-201ENST00000458717 1058 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 MESTP3-201ENST00000503460 968 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC106794.1-201ENST00000506935 792 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC024681.1-201ENST00000521917 487 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC134698.3-201ENST00000523880 214 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC013355.1-201ENST00000562625 723 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 MIR3907-201ENST00000579424 151 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC138466.3-201ENST00000619983 221 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 AL353726.2-201ENST00000623259 884 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 AC009090.5-201ENST00000624886 2285 ntBASIC15.23■□□□□ 0.03
EBF1Q9UH73 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
EBF1Q9UH73 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.23■□□□□ 0.03
EBF1Q9UH73 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.22■□□□□ 0.03
EBF1Q9UH73 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF1Q9UH73 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.22■□□□□ 0.03
EBF1Q9UH73 AC005840.4-201ENST00000541242 2494 ntBASIC15.22■□□□□ 0.03
EBF1Q9UH73 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF1Q9UH73 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
EBF1Q9UH73 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF1Q9UH73 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EBF1Q9UH73 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms