Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC079776.1-201ENST00000401540 1152 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC016694.1-201ENST00000434179 700 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 KLF2P4-201ENST00000451959 1225 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 CROCCP4-201ENST00000457096 498 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC106760.1-201ENST00000508690 800 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC104989.1-201ENST00000519711 778 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AL008721.1-201ENST00000609964 604 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN8Q9UBY8 AJ011931.1-201ENST00000618749 2492 ntBASIC12.71□□□□□ -0.37
CLN8Q9UBY8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
CLN8Q9UBY8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 REXO1L4P-201ENST00000605109 1937 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 AP000845.1-201ENST00000581677 2131 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 MIR658-201ENST00000385210 100 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 ACTBP8-201ENST00000403258 1108 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 AL139094.1-201ENST00000405549 1188 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 AC007551.1-201ENST00000457394 519 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 AC133552.6-201ENST00000613406 534 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.7□□□□□ -0.38
CLN8Q9UBY8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CLN8Q9UBY8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms