Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 FAM8A4P-201ENST00000435433 1213 ntBASIC14.94□□□□□ -0.02
SPASTQ9UBP0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 AP001258.2-201ENST00000529891 490 ntBASIC14.94□□□□□ -0.02
SPASTQ9UBP0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 MIR3615-201ENST00000581999 87 ntBASIC14.94□□□□□ -0.02
SPASTQ9UBP0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.94□□□□□ -0.02
SPASTQ9UBP0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPASTQ9UBP0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.93□□□□□ -0.02
SPASTQ9UBP0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 BCYRN1-201ENST00000418539 200 ntBASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AC007969.1-201ENST00000433675 447 ntBASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 CNN2P10-201ENST00000443067 918 ntBASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AL591846.1-201ENST00000451736 433 ntBASIC14.93□□□□□ -0.02
SPASTQ9UBP0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
SPASTQ9UBP0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms