Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 AC000095.1-201ENST00000603208 874 ntBASIC18.42■□□□□ 0.54
UPF2Q9HAU5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 AC016397.2-201ENST00000624848 1985 ntBASIC18.42■□□□□ 0.54
UPF2Q9HAU5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.42■□□□□ 0.54
UPF2Q9HAU5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 AC004461.1-201ENST00000412461 403 ntBASIC18.41■□□□□ 0.54
UPF2Q9HAU5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 AC093520.2-201ENST00000561830 333 ntBASIC18.41■□□□□ 0.54
UPF2Q9HAU5 AC005829.1-201ENST00000570002 483 ntBASIC18.41■□□□□ 0.54
UPF2Q9HAU5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC18.41■□□□□ 0.54
UPF2Q9HAU5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 APP-205ENST00000358918 2366 ntTSL 5 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 AL137783.1-201ENST00000623494 1896 ntBASIC18.4■□□□□ 0.54
UPF2Q9HAU5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
UPF2Q9HAU5 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms