Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 VDAC1P1-201ENST00000439229 848 ntBASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 EIF5AP2-201ENST00000585668 1047 ntBASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 AC105137.3-201ENST00000617588 984 ntBASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 AC073911.3-201ENST00000624401 631 ntBASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 LINC00431-202ENST00000636375 159 ntBASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 E2F3P2-201ENST00000447755 1422 ntBASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UBE2OQ9C0C9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 KRT8P21-201ENST00000430398 1491 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 SHC1P1-201ENST00000425230 1745 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 AC055811.4-201ENST00000624039 1754 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 PSMD4P1-201ENST00000433951 1109 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 CHCHD2P9-201ENST00000461726 456 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 AC024293.1-201ENST00000467930 498 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 AC079416.2-201ENST00000625035 1193 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 AC002472.3-201ENST00000640124 621 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 CICP13-201ENST00000422015 2789 ntBASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.42■□□□□ 0.22
UBE2OQ9C0C9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 BAK1P1-201ENST00000317045 636 ntBASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 MIR5196-201ENST00000578146 115 ntBASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 AC011247.3-201ENST00000603297 438 ntBASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 MIR6769A-201ENST00000617340 73 ntBASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE2OQ9C0C9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms