Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 AL031719.1-201ENST00000623365 2587 ntBASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 AC090505.1-201ENST00000430515 1834 ntBASIC12.15□□□□□ -0.46
NKX6-2Q9C056 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 FAM90A11P-201ENST00000518378 2218 ntBASIC12.15□□□□□ -0.46
NKX6-2Q9C056 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 AC073439.1-201ENST00000624121 1774 ntBASIC12.15□□□□□ -0.46
NKX6-2Q9C056 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NKX6-2Q9C056 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NKX6-2Q9C056 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
NKX6-2Q9C056 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 AL691432.1-201ENST00000596308 1422 ntBASIC12.14□□□□□ -0.47
NKX6-2Q9C056 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 AC004987.2-201ENST00000395959 1148 ntBASIC12.14□□□□□ -0.47
NKX6-2Q9C056 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 CXCL1P1-201ENST00000502804 216 ntBASIC12.14□□□□□ -0.47
NKX6-2Q9C056 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 AC025062.2-201ENST00000605477 670 ntBASIC12.14□□□□□ -0.47
NKX6-2Q9C056 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 ACTL9-202ENST00000612068 1252 ntBASIC12.14□□□□□ -0.47
NKX6-2Q9C056 NPAP1P7-201ENST00000613027 823 ntBASIC12.14□□□□□ -0.47
NKX6-2Q9C056 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX6-2Q9C056 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms